KEGG   Bos taurus (cow): 281914
Entry
281914            CDS       T01008                                 
Symbol
MMP13
Name
(RefSeq) collagenase 3 precursor
  KO
K07994  matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
bta  Bos taurus (cow)
Pathway
bta04657  IL-17 signaling pathway
bta04926  Relaxin signaling pathway
bta04928  Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:bta00001]
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    281914 (MMP13)
  09152 Endocrine system
   04926 Relaxin signaling pathway
    281914 (MMP13)
   04928 Parathyroid hormone synthesis, secretion and action
    281914 (MMP13)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:bta01002]
    281914 (MMP13)
Peptidases and inhibitors [BR:bta01002]
 Metallo peptidases
  Family M10
   281914 (MMP13)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_3 Reprolysin_4 Reprolysin_5 DUF4953
Other DBs
NCBI-GeneID: 281914
NCBI-ProteinID: NP_776814
BGD-bta: BT10004
Ensembl: ENSBTAG00000015059
VGNC: 31518
UniProt: O77656
Position
15:5670942..5681601
AA seq 471 aa
MHPRVLAGFLFFSWTACWSLPLPSDGDSEDLSEEDFQFAESYLKSYYYPQNPAGILKKTA
ASSVIDRLREMQSFFGLEVTGRLDDNTLDIMKKPRCGVPDVGEYNVFPRTLKWSKMNLTY
RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDG
PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALM
FPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPYSKHPKTPDKCDPSLSLDAITSLRGET
LIFKDRFFWRLHPQQVEAELFLTKSFGPELPNRIDAAYEHPSHDLIFIFRGRKFWALSGY
DILEDYPKKISELGFPKHVKKISAALHFEDSGKTLFFSENQVWSYDDTNHVMDKDYPRLI
EEVFPGIGDKVDAVYQKNGYIYFFNGPIQFEYSIWSNRIVRVMTTNSLLWC
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgcacccaagggtcctggctggcttcctcttcttcagctggacggcttgttggtctctg
ccccttcccagtgatggagattctgaagacttgtccgaggaagacttccagtttgcagag
agctacctgaaatcatactactatcctcagaatcctgctggaatcctgaagaaaactgca
gcaagctctgtgattgacaggcttagagaaatgcagtcattttttggcttagaggtgact
ggcagacttgatgataacaccttagacatcatgaaaaaaccaagatgtggggtccctgat
gtgggtgaatacaatgtttttcctcgaactctcaagtggtccaaaatgaacttaacctac
agaattgtgaattatacacctgatctgactcattctgaagtggaaaaggccttcagaaaa
gccttcaaggtgtggtctgatgtgacccctctgaattttaccagaattcacaatggcact
gctgatatcatgatctcttttggaactaaagagcatggtgacttctacccatttgatgga
ccctctggtctgttggctcacgctttccctcctggaccaaattatggaggagatgctcat
tttgatgatgatgaaacctggacaagtagttccaaaggctacaacttgtttcttgttgct
gcccatgagtttggccattccttaggattggaccactccaaggacccaggagcactcatg
tttcccatctacacctacactggcaaaagccactttatgcttcctgatgatgatgtccaa
gggattcagtctctctatggtccaggagatgaagacccctactctaaacatcccaaaacg
ccagacaaatgtgacccttccttatcccttgatgccataaccagtctccgcggagaaaca
ctgatctttaaagacagattcttctggcggctgcatcctcagcaggttgaagcagagctg
tttttaacaaaatcgtttgggccagaacttcccaaccgtattgatgccgcctatgagcac
ccttcccatgaccttatcttcatctttagaggcagaaaattttgggcacttagtggttat
gatattctggaagattacccaaaaaaaatatctgaactgggatttccaaaacacgttaaa
aagatcagcgcagcccttcactttgaggattcagggaagacgctcttcttttcagaaaac
caagtctggagctatgatgacactaaccatgtgatggataaagactacccgagactcatt
gaagaggtcttcccaggaattggtgataaagtagatgctgtctaccagaaaaatggttat
atctattttttcaatggacccatacagtttgaatacagcatctggagtaaccgtattgtt
cgagtcatgacaacaaattccttattgtggtgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (38)   

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